Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs35159958 chr7:7059224 C/T 8.69E-5 275 25.15 26.83 19.17 KM Plot
KIRP rs35173225 chr7:73001021 C/T 5.56E-6 285 26.4 18.9 11.2 KM Plot
KIRP rs35209570 chr16:74504985 A/T 2.05E-5 286 24.8 28.68 17.13 KM Plot
KIRP rs35243068 chr6:28673434 G/A 2.9E-8 281 25.57 26.37 9.77 KM Plot
KIRP rs35303372 chr19:23642691 A/AC 2.31E-5 288 27.47 24.73 20.8 KM Plot
KIRP rs35332062 chr7:73012042 G/A 2.14E-6 281 26.73 18.02 11.2 KM Plot
KIRP rs35337219 chr6:27542282 CT/C 1.36E-8 288 25.58 28.17 9.77 KM Plot
KIRP rs35345226 chr6:28091580 A/G 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs35352766 chr2:234176108 T/TA 0.000176 285 25.08 27.47 24.4 KM Plot
KIRP rs35353359 chr6:28324378 C/T 1.68E-8 287 25.6 26.4 9.77 KM Plot
KIRP rs35413563 chr9:123311433 CA/C 3.35E-6 283 10.77 21.9 26.37 KM Plot
KIRP rs35415928 chr16:89724268 C/T 3.66E-8 279 26.28 25.6 9.77 KM Plot
KIRP rs35461885 chr11:65650515 G/T 5.26E-7 278 25.5 41.7 8.92 KM Plot
KIRP rs35473994 chr3:124498105 G/A 3.86E-5 286 26.1 25.65 16.47 KM Plot
KIRP rs35491132 chr6:27527227 GT/G 1.18E-8 289 25.62 27.27 9.77 KM Plot